Ditlev E. Brodersen: search on Z-Library

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1

Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon

Sabine Petry, Ditlev E. Brodersen, Frank V. Murphy IV, Christine M. Dunham, Maria Selmer, Michael J. Tarry, Ann C. Kelley, V. Ramakrishnan

Journal:

Year:

2005

Language:

english

File:

PDF, 1.10 MB

english, 2005

2

An update to polyketide synthase and non-ribosomal synthetase genes and nomenclature in Fusarium

Hansen, Frederik T., Gardiner, Donald M., Lysøe, Erik, Fuertes, Patricia Romans, Tudzynski, Bettina, Wiemann, Philipp, Sondergaard, Teis Esben, Giese, Henriette, Brodersen, Ditlev E., Sørensen, Jens L

Journal:

Fungal Genetics and Biology

Year:

2015

Language:

english

File:

PDF, 995 KB

english, 2015

3

Structural basis for (p)ppGpp synthesis by the Staphylococcus aureus small alarmone synthetase RelP

Manav, Melek Cemre, Beljantseva, Jelena, Bojer, Martin Saxtorph, Tenson, Tanel, Ingmer, Hanne, Hauryliuk, Vasili, Brodersen, Ditlev Egeskov

Journal:

Journal of Biological Chemistry

Year:

2018

Language:

english

File:

PDF, 3.17 MB

english, 2018

4

Shape can be seductive

Brodersen, Ditlev E., Ramakrishnan, V.

Journal:

Natural Structural Biology

Year:

2003

Language:

english

File:

PDF, 289 KB

english, 2003

5

Crystal structure of the 30 s ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16 s RNA

Ditlev E. Brodersen, William M. Clemons Jr, Andrew P. Carter, Brian T. Wimberly, V. Ramakrishnan

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 3.01 MB

english, 2002

6

RRM domain of human RBM7: purification, crystallization and structure determination

Sofos, Nicholas, Winkler, Mikael B. L., Brodersen, Ditlev E.

Journal:

Acta Crystallographica Section F Structural Biology Communications

Year:

2016

Language:

english

File:

PDF, 1.55 MB

english, 2016

7

Investigation of exponential RNA amplification by the Qβ replicase complex

Olesen, Heidi, Knudsen, Charlotte, Seweryn, Paulina, Brodersen, Ditlev, Kutlubaeva, Zarina, Chetverin, Alexander, Mulder, Frans, Jensen, Lars Alf, Yoshimura, Yuichi

Journal:

Acta Crystallographica Section A Foundations and Advances

Year:

2014

Language:

english

File:

PDF, 602 KB

english, 2014

8

The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain

Manav, Melek Cemre, Turnbull, Kathryn Jane, Jurėnas, Dukas, Garcia-Pino, Abel, Gerdes, Kenn, Brodersen, Ditlev Egeskov

Journal:

Year:

2019

Language:

english

File:

PDF, 4.86 MB

english, 2019

9

The Structural Basis for mRNA Recognition and Cleavage by the Ribosome-Dependent Endonuclease RelE

Cajetan Neubauer, Yong-Gui Gao, Kasper R. Andersen, Christine M. Dunham, Ann C. Kelley, Jendrik Hentschel, Kenn Gerdes, V. Ramakrishnan, Ditlev E. Brodersen

Journal:

Year:

2009

Language:

english

File:

PDF, 1.72 MB

english, 2009

10

Publisher Correction: Anti-CRISPR proteins encoded by archaeal lytic viruses inhibit subtype I-D immunity

He, Fei, Bhoobalan-Chitty, Yuvaraj, Van, Lan B., Kjeldsen, Anders L., Dedola, Matteo, Makarova, Kira S., Koonin, Eugene V., Brodersen, Ditlev E., Peng, Xu

Journal:

Nature Microbiology

Year:

2018

Language:

english

File:

PDF, 1.03 MB

english, 2018

11

The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain

Manav, Melek Cemre, Turnbull, Kathryn Jane, Jurėnas, Dukas, Garcia-Pino, Abel, Gerdes, Kenn, Brodersen, Ditlev Egeskov

Journal:

Year:

2019

File:

PDF, 4.86 MB

2019

12

The transcriptional regulator GalR self-assembles to form highly regular tubular structures

Agerschou, Emil D., Christiansen, Gunna, Schafer, Nicholas P., Madsen, Daniel Jhaf, Brodersen, Ditlev E., Semsey, Szabolcs, Otzen, Daniel E.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 2.03 MB

english, 2016

13

Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology

Harms, Alexander, Brodersen, Ditlev Egeskov, Mitarai, Namiko, Gerdes, Kenn

Journal:

Year:

2018

Language:

english

File:

PDF, 4.06 MB

english, 2018

14

Polymorphisms in the NFkB, TNF-alpha, IL-1beta, and IL-18 pathways are associated with response to anti-TNF therapy in Danish patients with inflammatory bowel disease

Bank, Steffen, Julsgaard, Mette, Abed, Osama Karim, Burisch, Johan, Broder Brodersen, Jacob, Pedersen, Natalia Konstantinovich, Gouliaev, Anja, Ajan, Rullah, Nytoft Rasmussen, Ditlev, Honore Grauslund

Journal:

Alimentary Pharmacology & Therapeutics

Year:

2019

Language:

english

File:

PDF, 1.09 MB

english, 2019

15

The Crystal Structure of the Intact E. coli RelBE Toxin-Antitoxin Complex Provides the Structural Basis for Conditional Cooperativity

Andreas Bøggild, Nicholas Sofos, Kasper R. Andersen, Ane Feddersen, Ashley D. Easter, Lori A. Passmore, Ditlev E. Brodersen

Journal:

Year:

2012

Language:

english

File:

PDF, 2.30 MB

english, 2012

16

Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding

Bendtsen, Kirstine L., Xu, Kehan, Luckmann, Majbritt, Winther, Kristoffer S., Shah, Shiraz A., Pedersen, Christian N. S., Brodersen, Ditlev E.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 3.71 MB

english, 2016

17

Take the “A” tail – quality control of ribosomal and transfer RNA

Kasper R. Andersen, Torben Heick Jensen, Ditlev E. Brodersen

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

Year:

2008

Language:

english

File:

PDF, 735 KB

english, 2008

18

Structural basis for inhibition of an archaeal CRISPRâCas type I-D large subunit by an anti-CRISPR protein

Manav, M. Cemre, Van, Lan B., Lin, Jinzhong, Fuglsang, Anders, Peng, Xu, Brodersen, Ditlev E.

Journal:

Nature Communications

Year:

2020

File:

PDF, 2.36 MB

2020

19

Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties

Andreas Bøggild, Martin Overgaard, Poul Valentin-Hansen, Ditlev E. Brodersen

Journal:

Year:

2009

Language:

english

File:

PDF, 909 KB

english, 2009

20

VapC20 of Mycobacterium tuberculosis cleaves the Sarcin–Ricin loop of 23S rRNA

Winther, Kristoffer S., Brodersen, Ditlev E., Brown, Alistair K., Gerdes, Kenn

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 1.94 MB

english, 2013

21

Computational discovery of specificity-conferring sites in non-ribosomal peptide synthetases

Knudsen, Michael, Søndergaard, Dan, Tofting-Olesen, Claus, Hansen, Frederik T., Brodersen, Ditlev Egeskov, Pedersen, Christian N. S.

Journal:

Year:

2015

Language:

english

File:

PDF, 301 KB

english, 2015

22

The social life of ribosomal proteins

Ditlev E. Brodersen, Poul Nissen

Journal:

Year:

2005

Language:

english

File:

PDF, 550 KB

english, 2005

23

10.1038/35030006

Ramakrishnan, V., Wimberly, Brian T., Brodersen, Ditlev E., Clemons, William M., Morgan-Warren, Robert J., Carter, Andrew P., Vonrhein, Clemens, Hartsch, Thomas

Journal:

Year:

2000

Language:

english

File:

PDF, 1.66 MB

english, 2000

24

Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: purification, crystallization and structure determination

William M. Clemons Jr, Ditlev E. Brodersen, John P. McCutcheon, Joanna L.C. May, Andrew P. Carter, Robert J. Morgan-Warren, Brian T. Wimberly, V. Ramakrishnan

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 482 KB

english, 2001

25

Structural insights into the bacterial carbon–phosphorus lyase machinery

Seweryn, Paulina, Van, Lan Bich, Kjeldgaard, Morten, Russo, Christopher J., Passmore, Lori A., Hove-Jensen, Bjarne, Jochimsen, Bjarne, Brodersen, Ditlev E.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.84 MB

english, 2015

26

10.1038/35030019

Ramakrishnan, V., Carter, Andrew P., Clemons, William M., Brodersen, Ditlev E., Morgan-Warren, Robert J., Wimberly, Brian T.

Journal:

Year:

2000

Language:

english

File:

PDF, 989 KB

english, 2000

27

The Prodigal Compound: Return of Ribosyl 1,5-Bisphosphate as an Important Player in Metabolism

Hove-Jensen, Bjarne, Brodersen, Ditlev E., Manav, M. Cemre

Journal:

Microbiology and Molecular Biology Reviews

Year:

2018

Language:

english

File:

PDF, 6.31 MB

english, 2018

28

Structural analysis of the yeast exosome Rrp6p–Rrp47p complex by small-angle X-ray scattering

Dedic, Emil, Seweryn, Paulina, Jonstrup, Anette Thyssen, Flygaard, Rasmus Koch, Fedosova, Natalya U., Hoffmann, Søren Vrønning, Boesen, Thomas, Brodersen, Ditlev Egeskov

Journal:

Biochemical and Biophysical Research Communications

Year:

2014

Language:

english

File:

PDF, 1.22 MB

english, 2014

29

Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri

Xu, Kehan, Dedic, Emil, Brodersen, Ditlev E.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2016

Language:

english

File:

PDF, 627 KB

english, 2016

30

Mimer : an automated spreadsheet-based crystallization screening system

Brodersen, Ditlev Egeskov, Andersen, Gregers Rom, Andersen, Christian Brix Folsted

Journal:

Acta Crystallographica Section F Structural Biology and Crystallization Communications

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

31

Serine-Threonine Kinases Encoded by Split hipA Homologs Inhibit Tryptophanyl-tRNA Synthetase

Vang Nielsen, Stine, Turnbull, Kathryn Jane, Roghanian, Mohammad, Bærentsen, Rene, Semanjski, Maja, Brodersen, Ditlev E., Macek, Boris, Gerdes, Kenn, Laub, Michael T.

Journal:

Year:

2019

Language:

english

File:

PDF, 1.75 MB

english, 2019

32

Anti-CRISPR proteins encoded by archaeal lytic viruses inhibit subtype I-D immunity

He, Fei, Bhoobalan-Chitty, Yuvaraj, Van, Lan B., Kjeldsen, Anders L., Dedola, Matteo, Makarova, Kira S., Koonin, Eugene V., Brodersen, Ditlev E., Peng, Xu

Journal:

Nature Microbiology

Year:

2018

Language:

english

File:

PDF, 2.19 MB

english, 2018

33

Crystal Structure of the VapBC Toxin–Antitoxin Complex from Shigella flexneri Reveals a Hetero-Octameric DNA-Binding Assembly

Christian Dienemann, Andreas Bøggild, Kristoffer S. Winther, Kenn Gerdes, Ditlev E. Brodersen

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.08 MB

english, 2011

34

Identification of the non-ribosomal peptide synthetase responsible for biosynthesis of the potential anti-cancer drug sansalvamide inFusarium solani

Romans-Fuertes, Patricia, Sondergaard, Teis Esben, Sandmann, Manuela Ilse Helga, Wollenberg, Rasmus Dam, Nielsen, Kristian Fog, Hansen, Frederik T., Giese, Henriette, Brodersen, Ditlev Egeskov, Sørens

Journal:

Current Genetics

Year:

2016

Language:

english

File:

PDF, 675 KB

english, 2016

35

Protein expression, crystallization and preliminary X-ray crystallographic analysis of the isolated Shigella flexneri VapC toxin

Xu, Kehan, Dedic, Emil, Cob-Cantal, Patricia, Dienemann, Christian, Bøggild, Andreas, Winther, Kristoffer S., Gerdes, Kenn, Brodersen, Ditlev E.

Journal:

Acta Crystallographica Section F Structural Biology and Crystallization Communications

Year:

2013

Language:

english

File:

PDF, 457 KB

english, 2013

36

Cut to the chase–Regulating translation through RNA cleavage

Sofos, Nicholas, Xu, Kehan, Dedic, Emil, Brodersen, Ditlev E.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.54 MB

english, 2015

37

Structural studies of the human Nuclear EXosome Targeting complex

Sofos, Nicholas, Winkler, Mikael B., Brodersen, Ditlev E.

Journal:

Acta Crystallographica Section A Foundations and Advances

Year:

2015

File:

PDF, 600 KB

2015

38

The RES domain toxins of RES-Xre toxin-antitoxin modules induce cell stasis by degrading NAD +

Skjerning, Ragnhild Bager, Senissar, Meriem, Winther, Kristoffer, Gerdes, Kenn, Brodersen, Ditlev E.

Journal:

Molecular Microbiology

Year:

2018

Language:

english

File:

PDF, 1.31 MB

english, 2018

39

The Structural Basis for the Action of the Antibiotics Tetracycline, Pactamycin, and Hygromycin B on the 30S Ribosomal Subunit

Ditlev E. Brodersen, William M. Clemons Jr., Andrew P. Carter, Robert J. Morgan-Warren, Brian T. Wimberly, V. Ramakrishnan

Journal:

Year:

2000

Language:

english

File:

PDF, 1.46 MB

english, 2000

40

The Abc of Phosphonate Breakdown: A Mechanism for Bacterial Survival

Manav, M. Cemre, Sofos, Nicholas, Hove-Jensen, Bjarne, Brodersen, Ditlev E.

Journal:

Year:

2018

Language:

english

File:

PDF, 3.07 MB

english, 2018

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